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Search: Posts Made By: rayken1
Forum: Perl Aug 18th, 2009
Replies: 1
Views: 550
Posted By rayken1
kindly help me to get out the error of " Use of uninitialized Value $_ in substitution.

my code is.....

#!/usr/bin/perl
use warnings;
use strict;

open (TEXT_FILE1,'C:\Documents and...
Forum: Perl Aug 3rd, 2009
Replies: 1
Views: 359
Posted By rayken1
use warnings;
use strict;

open (TEXT_FILE,'C:\Documents and Settings\rnjenga\sawa3.txt');


my ($line, $nextline);
while ($line = <TEXT_FILE>) {
Forum: Perl Jul 20th, 2009
Replies: 7
Views: 693
Posted By rayken1
Thanks a lot Wickedxter, The code did work perfectly.
God Bless You.
Forum: Perl Jul 13th, 2009
Replies: 7
Views: 693
Posted By rayken1
Hi Prakash and Onclav2000,

Thanks for your answers. I still having some problem in solving my problem. I have sent the structure of the file am dealing with and the code I have so far come up with...
Forum: Perl Jul 2nd, 2009
Replies: 7
Views: 693
Posted By rayken1
Hi Prakash,
What I want to do is :

a) The file with the above info. s opened and read as strings,
B) I need a REGEX that would be able to capture this block of
letters,

FT CDS...
Forum: Perl Jun 30th, 2009
Replies: 7
Views: 693
Posted By rayken1
FT CDS complement(join ( 14006...14068, 19351..20068))
FT /locus_tag= TP01_0004”
FT /note=”go function: nutrient reservoir activity [goid
FT 0045889]



The above...
Forum: Perl Jun 24th, 2009
Replies: 3
Views: 385
Posted By rayken1
open(FILE, "<", "numb.txt" ) || die "Unable to open numb.txt <$!>\n";

while ( <FILE> ) {
chomp;
$fileHash{$_} = $i++;
}

close(FILE);

open(FILE, "<", "num.txt" ) || die "Unable to open...
Forum: Perl Jun 11th, 2009
Replies: 1
Views: 333
Posted By rayken1
/transcript_id="XM_760437.1"
FT /db_xref="GI:71031776"
FT /db_xref="GeneID:3502673"
FT CDS complement(join(18028..18116,19351..20668))
FT ...
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