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Search: Posts Made By: annie_singh
Forum: Perl Oct 1st, 2008
Replies: 5
Views: 1,737
Posted By annie_singh
hi,

Well, I did get extract the three columns with the script, but i wanted to know how to calculate the distance and put them in an output file.

The distance calculation is between row1_row2,...
Forum: Perl Oct 1st, 2008
Replies: 5
Views: 1,737
Posted By annie_singh
Hello,

I am a beginner in perl. I am stuck with a problem. I have an array which looks like this

6.324 32.707 50.379
5.197 32.618 46.826
4.020 36.132 46.259
7.131 38.210 45.919
6.719...
Forum: Perl Oct 1st, 2008
Replies: 3
Views: 813
Posted By annie_singh
Thank you so much.. that really helped me solve the problem
Forum: Perl Sep 30th, 2008
Replies: 3
Views: 813
Posted By annie_singh
Hello,

I have a file with the data as shown below:

ATOM 2 CA ARG A 1 6.324 32.707 50.379
ATOM 13 CA THR A 2 5.197 32.618 46.826
ATOM 20 CA ASP A...
Forum: Perl Sep 30th, 2008
Replies: 2
Views: 1,909
Posted By annie_singh
hi,

I want to know what is the regular expression to be written in order to match

ATOM 2 CA ARG A 1 6.324 32.707 50.379

the above XYZ coordinates in this line. I have a pdb...
Forum: Perl Sep 29th, 2008
Replies: 2
Views: 1,909
Posted By annie_singh
Hello,

I am new to perl, but I would like write a perl script that can convert xyz cordinates from a pdb file to distances using the formula:
distance = SQRT[(X1-X2)^2 + (Y1-Y2)^2 +...
Showing results 1 to 6 of 6

 


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