Sounds to me like someone needed some extra disk space for downloads, and deleted what to him seemed like unnecessary files.
Going back to an earlier system date won't undelete files. And if the disk space was used for other purposes in the meantime (downloads and defrag will both do that), the files are permanently gone.
Where's the backup disk of the files? Oh, let me guess... There's no backup.
Lesson learned: Make backups.
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