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Member Avatar for smandape

Thank you for looking at my question. I am trying to solve this homework question. Consider the problem of sequencing genome by random reads. If G is the length of the entire sequence, L is the length of the read and n is the number of reads, then coverage is …

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Member Avatar for BioJavaPhobic

This is very much a bioinformatics problem, so any bioinformaticians familiar with the eUtilities of the NCBI, your help would be much appreciated. I have the following code to get links from a Pubmed search: [CODE]use Bio::DB::EUtilities; my $factory = Bio::DB::EUtilities->new(-eutil => 'elink', -email => 'mymail@foo.bar', -dbfrom => 'pubmed', -cmd …

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Member Avatar for JimmyK101

Hi guys, How do i extract a sequences from a fasta file by taking the start and end position from a gene predicted file: here the example the file with the orf statistics is my predicted file and for example the start position for the first orf is 65 and …

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