joe82

Hello everyone, I am writting a code where result is not coming correct because I am not able to join 2 lines to make a single line. Please help me e.g my input file is: AATTCCGGTTT CCTTAACCCCC I want my code to first join them together as AATTCCGGTTTCCTTAACCCCC and then …

Hello everyone, My file had 12 columns, I want those lines in my file where numbers in columns 9 and 10 includes digit "101". For example : i am giving 3 lines of my file: ( columns to focus are colored green). NM013123 14-74726235 100.00 18 0 0 11 28 …

Hello everyone, My file has lines like: >9|102396631|genome..... CCACTTTCTCTCCGCGCTGGGTTGAACATGGTACATCAGACTCCCTGAATCTGTCAGATC TCTTGGTTGCTGTTGACAACTAAGACTTCGGAGCCTGGAG_GATTTGTTGAGGGGGAGCA GTTCTGGGTGTCCTCTGCTGTGACTGGGCTCCCGGCCTCTTGATAATGCGCAACAGCTGC GGTAGAACATCTCATTCCCAG >9|102362951|ENSRNOS.... I want to delete blank lines from this file please help me... Thanks

Hello everyone, My file has text like: gnl|dbSNP|rs13484118 gi|62750812|ref|NC_005111.2|NC_005111 95 20 1 0 68 87 31017559 31017578 4.4 32.3 gnl|dbSNP|rs13484118 gi|62750812|ref|NC_005111.2|NC_005111 91.67 24 2 0 63 86 35247737 35247714 4.4 32.3 gnl|dbSNP|rs13484118 gi|62750812|ref|NC_005111.2|NC_005111 91.67 24 2 0 64 87 40549054 40549031 4.4 32.3 gnl|dbSNP|rs13484118 gi|62750812|ref|NC_005111.2|NC_005111 92 24 2 0 63 …

Hello everyone, my file1.txt have sequences as given below: >1|62798264|[COLOR="Red"]rs8174605[/COLOR]|T/C||dbSNP|T/C AAGAGGAGAAAGCAAAGTTGCAAAAGGTGAAAGAGAAAGAAGAGCTAGAGAAGGGCAGGA AGGAGCAGAGTAAGCAGAGGGAGCCTCAGAAGAGACCGGA_GAGGAGGTGTTGGTGCTCA >1|100159271|ENSRNOSNP145|T/A||ENSEMBL:celera|T/A TCTTATAATTAGTCATTGTGATAACTGCTACAAACAAAGTCACAGGATCTTGTGAGAGAA >1|19033646|[COLOR="Red"]rs8173848[/COLOR]|C/T||dbSNP|C/T TTGCAAAAAAAAAAAAAAAAAAAAAAAGCCAGAATCCAGCATAAGTCAAGGAAATCCACT >1|149643853|[COLOR="Red"]rs8173465[/COLOR]|G/T||dbSNP|G/T AACAGAGACAGCTGTGATGTACCCCATGAGCTGGAAAGAGCAGCCCAGCGGTGTCCCAGC >1|101456015|ENSRNOSNP1318|G/C||ENSEMBL:celera|G/C AACTCTTAGAAGTTAGAACCTGGGGTGGAGAGATGGCTTGGTGGTTGAGAGCATTGACTG I want result file which do not have sequences with "rs"number e.g rs8177678, these are colored red in each sequence. so my output file should have 2 sequences: >1|100159271|ENSRNOSNP145|T/A||ENSEMBL:celera|T/A TCTTATAATTAGTCATTGTGATAACTGCTACAAACAAAGTCACAGGATCTTGTGAGAGAA …

hello everyone, my file has many long lines witth 12 ccolumns like: gnl|dbS|13484118 gi|62750812 100 16 .......around 12 columns gnl|dbS|13484888 gi|62750812 95 20 ....... gnl|dbS|22484118 gi|62750812 92 20 .......... I want to grab the lines where values of column 3 lies between 90 - 99.9 in the file and store …