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Member Avatar for bioinfo90

i NEED A PERL SCRIPT TO CREATE NAME_DIRECTORY FOR ALL TRAJECTORIES. i've trajectory files like this, rep2.tra3M.bz2 rep2.tra4M.bz2 rep2.tra5M.bz2 rep2.tra6M.bz2 rep2.tra7M.bz2 i want a scipt to list all replicas,copy zipped replicas and unzip all replicas and create a file with list of replicas and call make_pdb.pl for all trajectories.

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Member Avatar for bioinfo90

Im new to perl and i want a perl script to convert each coordinate file of different proteins(decoys) to pdb file format.this is the script i wrote so far. open (f1, "rep.tra1"); while ($line = <f1>) { chomp $line ; @det+split (" ", $line ); $num= @det; if ($num = …

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