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Member Avatar for BioJavaPhobic

I want to remove all lines in a text file that start with HPL_ I have acheived this and can print to screen, but when I try to write to a file, I just get the last line of the amended text printed in the new file. Any help please, …

Member Avatar for roswell1329
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Member Avatar for BioJavaPhobic

Hi, I have a folder containing a further 2500 folders or so. These all contain files. I want to move the files from within only a selection of around 260 of these folders into a new folder. I have a text list of the folders of interest. So basically I …

Member Avatar for roswell1329
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Member Avatar for BioJavaPhobic

This is very much a bioinformatics problem, so any bioinformaticians familiar with the eUtilities of the NCBI, your help would be much appreciated. I have the following code to get links from a Pubmed search: [CODE]use Bio::DB::EUtilities; my $factory = Bio::DB::EUtilities->new(-eutil => 'elink', -email => 'mymail@foo.bar', -dbfrom => 'pubmed', -cmd …

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Member Avatar for BioJavaPhobic

Below is part of some code I have written. I am trying to see whether nodes in a network are connected, and thus finding 'failurepoints'. I have a vector containing node Ids which I loop through to check for connections using a hasPath method. This all works fine, but my …

Member Avatar for BioJavaPhobic
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Member Avatar for BioJavaPhobic

Hello, I'm a biologist trying to do some bioinformatics, so new to Java and new to this forum. I've searched all over the forum for previous threads on this topic, but can't find an answer that has helped me. Apologies if I've missed something already posted that may help solve …

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The End.