Hello, I am quite new to python programming and I need help with writing a code to calculate distance matrix from a text file that contains something like this:
ACCGGTGGAACCGG-TAACACCCAC
ACCGGT--AACCGGTTAACACCCAC
ACCGGTGGAACCGGTAACACCCAC-
ACCGGT--------TAACACCCAC-
Great question. Why? Because I wasn't aware this was worked on till you asked.
Read https://readiab.org/pairwise-alignment.html for some really good ideas and good enough solutions.
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